FishingCNV 1.5.2
Extract copy number variations from sequencing data
Extract copy number variations from sequencing data
Software Specs
Publisher:............ Yuhao Shi
License:............... GPL
File size:.............. 12.62 MB
Downloads:.........
Release date:...... 24 Apr 2013
Last update:........ 08 Oct 2014
Publisher review for FishingCNV 1.5.2:
Review by: Yuhao Shi
FishingCNV, a GUI software developed at McGill University, is a tool for comprehensive analysis of rare copy number variations in high-throughput exome sequencing data. The inputs are standard coverage files produced by Genome Analysis ToolKit (GATK), and the output is a file containing putative CNVs.
The program uses a large number of control files and is effective in identifying heterozygous as well as homozygous deletions and amplifications at the resolution of an exon. It should have vast applications in genome research.
Requirements:
Java
Operating system:
Windows 8, Windows 7, Windows Vista, Windows XP, Windows 2000, Windows 98
FishingCNV screenshots:
FishingCNV download tags:
extract CNV CNV extraction sequence
Copyright information:
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