NGSEP 1.0.0.201305230906
A plugin for Eclipse designed for genome sequence analysis
A plugin for Eclipse designed for genome sequence analysis
Software Specs
Publisher:............ Daniel Felipe Cruz Galvis
License:............... GPL
File size:.............. 3.84 MB
Downloads:.........
Release date:...... 27 May 2013
Last update:........ 01 Nov 2014
Publisher review for NGSEP 1.0.0.201305230906:
Review by: Daniel Felipe Cruz Galvis
NGSEP (Next Generation Sequencing Eclipse Plugin), an integrated framework for analysis of high throughput sequencing reads. The main functionality of NGSEP is the variants detector, which allows to make simultaneous discovery of SNVs, small indels, and CNVs. NGSEP also provides a user interface for bowtie2 to perform mapping to the reference genome and other utilities such as alignments sorting, merging of variants from different samples, and functional annotation of variants. NGSEP is based on Eclipse which is one of the leading development environments for Java.
Requirements:
Eclipse
Operating system:
Windows 8, Windows 7, Windows Vista, Windows XP, Windows 2000, Windows 98
NGSEP screenshots:
NGSEP download tags:
genome sequence detect variant sequence
Copyright information:
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